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metagenome-assembled genome

Identifiers
BioSample: SAMEA8395182; SRA: ERS6080665
Organism
Granulicatella adiacens
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella
Attributes
collection datenot provided
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman oral cavity
environmental mediumnot provided
geographic locationnot provided
investigation typemetagenome-assembled genome
isolation sourcenot provided
project nameHuman Oral MAGs
sample nameSRR9217422-mag-bin.10
ENA first public2021-03-23
ENA last update2021-03-22
ENA-CHECKLISTERC000047
External IdSAMEA8395182
INSDC center aliasEMG
INSDC center nameEMG
INSDC first public2021-03-23T08:57:14Z
INSDC last update2021-03-22T20:42:53Z
INSDC statuspublic
Submitter IdSRR9217422-mag-bin.10
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwaremetaspades_v3.14.1
binning parametersdefault
binning softwareMetaWRAP v1.1
broker nameEMG broker account, EMBL-EBI
completeness score98.04
completeness softwareCheckM v1.1.3
contamination score0
geographic location (latitude)not provided
geographic location (longitude)not provided
metagenomic sourcehuman oral metagenome
sample derived fromSRS4893153
sequencing methodIllumina
taxonomic identity markermulti-marker approach
Description

This sample represents a metagenome-assembled genome from the metagenomic run SRR9217422

Submission
EBI; 2021-03-24
Accession:
SAMEA8395182
ID:
18469199

Supplemental Content

Recent activity

  • metagenome-assembled genome
    metagenome-assembled genome
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  • Granulicatella adiacens
    Granulicatella adiacens
    biosample
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