MIGS Cultured Bacterial/Archaeal sample from Esche... - BioSample

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Result Filters

Organism: Escherichia coli N1
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Attributes

broad-scale environmental context	terrestrial biome [ENVO:00000446]
serotype	O157:H29
collection date	missing
isolation and growth condition	missing
host	missing
latitude and longitude	missing
project name	Genomic anatomy of E.coli O157:H7 outbreaks: Insights into pathogenome evolution and population dynamics during the time-course of infection.
investigation type	bacteria_archaea
host taxonomy ID	9913 (9913)
local-scale environmental context	livestock-associated habitat [ENVO:02000005]
phenotype	missing
geographic location	missing
reference for biomaterial	missing
environmental medium	beef [ENVO:00003067]
environmental package	missing
number of replicons	missing
strain	N1
sample size (ul)	missing
NCBI TAXON_ID	1005567
finishing strategy (depth of coverage)	230.91
misc feature: metabolism	missing
nucleic acid extraction	missing
misc_param: food source material	beef
subspecific genetic lineage: clade	missing
assembly	Velvet 1.2.01
sequencing method	Illumina