MIGS Cultured Bacterial/Archaeal sample from Esche... - BioSample - NCBI

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MIGS Cultured Bacterial/Archaeal sample from Escherichia coli 99.0848 sample MS100015919

Identifiers: BioSample: SAMN01993078; Sample name: MS100015919

Organism: Escherichia coli 99.0848
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Package: MIGS: cultured bacteria/archaea; version 6.0

Attributes

broad-scale environmental context	terrestrial biome [ENVO:00000446]
serotype	O157:H7
collection date	1999
isolation and growth condition	missing
host	Homo sapiens
latitude and longitude	missing
project name	Genomic anatomy of E.coli O157:H7 outbreaks: Insights into pathogenome evolution and population dynamics during the time-course of infection.
investigation type	bacteria_archaea
host taxonomy ID	9606 (9606)
local-scale environmental context	human-associated habitat [ENVO:00009003]
phenotype	stx1neg, stx2neg, eaepos
geographic location	Argentina
reference for biomaterial	missing
environmental medium	feces [ENVO:00002003]
body product	stool
environmental package	missing
number of replicons	missing
strain	99.0848
sample size (ul)	missing
NCBI TAXON_ID	1005431
finishing strategy (depth of coverage)	79.2
misc feature: metabolism	missing
nucleic acid extraction	missing
subspecific genetic lineage: clade	missing
assembly	Celera Assembler 7.0
sequencing method	Illumina

Description: Keywords: GSC:MIxS;MIGS:6.0

Links: GSCID Genomic Anatomy Of E.coli O157-h7

BioProject: PRJNA65675 Escherichia coli 99.0848
Retrieve all samples from this project

Submission: University of Maryland School of Medicine, Institute for Genome Sciences, Lynn Schriml; 2013-03-27

Accession:: SAMN01993078
ID:: 1993078

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MIGS Cultured Bacterial/Archaeal sample from Escherichia coli 99.0848 sample MS1...
MIGS Cultured Bacterial/Archaeal sample from Escherichia coli 99.0848 sample MS100015919

biosample
RN7SL113P RNA, 7SL, cytoplasmic 113, pseudogene [Homo sapiens]
RN7SL113P RNA, 7SL, cytoplasmic 113, pseudogene [Homo sapiens]
Gene ID:106480951

Gene
LOC129934208 [Homo sapiens]
LOC129934208 [Homo sapiens]
Gene ID:129934208

Gene
crbn cereblon [Danio rerio]
crbn cereblon [Danio rerio]
Gene ID:445491

Gene

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