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Lachnospiraceae MAG, UW_TS_LCO2_10

Identifiers
BioSample: SAMN22412526; Sample name: UW_TS_LCO2_10
Organism
Lachnospiraceae bacterium
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; unclassified Lachnospiraceae
Package
MIMAG: metagenome-assembled genome; version 6.0
Attributes
collection date2020-02-20
geographic locationUSA: Madison, WI
latitude and longitude43.073847 N 89.413972 W
isolation sourceanaerobic bioreactor effluent: Solids-removed thin stillage fed, 6 d SRT, 35C, pH 5.5
isolateUW_TS_LCO2_10
broad-scale environmental contextbioreactor [ENVO:00002123]
local-scale environmental contextanaerobic bioreactor [ENVO:00002124]
environmental mediumbiological waste material [ENVO:01000373]
altitude287 m
ammonium2127.05 milligram per liter
dissolved oxygen0 micromole per kilogram
pH5.5
reference for biomaterial3300042970_27
relationship to oxygenanaerobe
sample collection device or methodSyringe
sample material processingBiomass centrifuged 10 min 10,000xg, aliquot frozen for DNA extraction
sample size1.5 milliliter
sample storage locationFreezer
sample storage temperature-80 degree Celcius
source material identifiersR2_100
temperature35 degree Celcius
sample typemetagenomic assembly
metagenome sourcebioreactor sludge metagenome
experimental factorSolids-removed thin stillage fed, 6 d SRT, 35C, pH 5.5
derived fromSAMN18243126
metagenomic1
environmental-sample1
Description

Improved metagenome assembled genome from a thin stillage fermenting bioreactor

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA708972 bioreactor sludge metagenome
Retrieve all samples from this project

Submission
University of Wisconsin-Madison, Kevin Myers; 2021-10-19
Accession:
SAMN22412526
ID:
22412526

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