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Lactobacillus timonensis MAG, UW_DM_LIMLAC3_3

Identifiers
BioSample: SAMN22412693; Sample name: UW_DM_LIMLAC3_3
Organism
[Lactobacillus] timonensis
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Limosilactobacillus
Package
MIMAG: metagenome-assembled genome; version 6.0
Attributes
collection date2020-01-25
geographic locationUSA: Madison, WI
latitude and longitude43.073051 N 89.401230 W
isolation sourceanaerobic bioreactor effluent; solid retention time of 6 days
isolateUW_DM_LIMLAC3_3
broad-scale environmental contextbioreactor [ENVO:00002123]
local-scale environmental contextanaerobic bioreactor [ENVO:00002124]
environmental mediumbiological waste material [ENVO:01000373]
dissolved oxygen0 micromole per kilogram
pH5.5
reference for biomaterial3300045589_9
relationship to oxygenanaerobe
sample collection device or methodSyringe
sample material processingBiomass centrifuged 10 min 10,000xrcf, aliquot frozen for DNA extraction
sample size2 milliliter
sample storage locationFreezer
sample storage temperature-80 degree Celcius
source material identifiersDMB5_7SRT_A
temperature35 degree Celcius
sample typemetagenomic assembly
metagenome sourcebioreactor sludge metagenome
derived fromSAMN22064474
experimental factorsolid retention time of 6 days
metagenomic1
environmental-sample1
Description

Improved metagenome assembled genome from a carbohydrate-rich, dairy manure hydrolysate fermenting bioreactor

Keywords: GSC:MIxS;MIMAG:6.0

BioProject
PRJNA768588 bioreactor sludge metagenome
Retrieve all samples from this project

Submission
University of Wisconsin-Madison, Kevin Myers; 2021-10-19
Accession:
SAMN22412693
ID:
22412693

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