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MIMS Environmental/Metagenome sample from Sus scrofa domesticus

Identifiers
BioSample: SAMN02645148; Sample name: 197_wd42.sff; SRA: SRS560723
Organism
Sus scrofa domesticus (domestic pig)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus; Sus scrofa
Package
MIMS: metagenome/environmental, host-associated; version 6.0
Attributes
environmental packageMIGS/MIMS/MIMARKS.host-associated
investigation typemetagenome
labelswine
broad-scale environmental contextswine intestinal tract
collection date8/6/2012
local-scale environmental contextnone
geographic locationUSA: Ames, Iowa
latitude and longitude42°02?05?N 93°37?12?W
environmental mediumfreshly voided feces
project nameAntibiotic (carbadox) effects on the swine gut microbiota
sample material processing1 gram of freshly voided feces
host197
host body temperature39
host growth conditionsambient
host taxonomy ID9825 (9825)
perturbationnon-medicated
sample size142 grams feces
sample storage duration114 to 6 months
sample storage temperature-20 degrees Celsius
host age103 days
host body productfeces
host dietPork Finisher diet (Kent Feeds, Muscatine, IA)
host family relationshipOffspring of sow B
host last mealnot fasted
host life stagegrower pig
host sexmale
Description

Keywords: GSC:MIxS;MIMS:6.0

BioProject
PRJNA237795 gut metagenome
Retrieve all samples from this project

Submission
USDA, Torey Looft; 2014-02-18
Accession:
SAMN02645148
ID:
2645148

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