Metagenome-Assembled Genome (MAG)

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Result Filters

Organism: Holdemania sp. Marseille-P2844
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania; unclassified Holdemania

Attributes

collection date	not provided
broad-scale environmental context	human-associated habitat
local-scale environmental context	human gut
environmental medium	faeces
geographic location	not provided
investigation type	metagenome-assembled genome
isolation source	human gut
project name	Donor samples from Lyophilised oral faecal microbiota transplantation for ulcerative colitis (LOTUS) study shotgun
sample name	MTG243_bin.60.fa
ENA-CHECKLIST	ERC000050
ENA-FIRST-PUBLIC	2022-07-28
ENA-LAST-UPDATE	2022-07-28
External Id	SAMEA13567308
INSDC center alias	UNIVERSITY OF NEW SOUTH WALES
INSDC center name	UNIVERSITY OF NEW SOUTH WALES
INSDC first public	2022-07-28T00:45:18Z
INSDC last update	2022-07-28T00:45:18Z
INSDC status	public
Submitter Id	MTG243_bin.60.fa
assembly software	MetaWRAP;1.3.2
binning parameters	default
binning software	MetaWRAP;1.3.2
geographic location (latitude)	not provided
geographic location (longitude)	not provided
metagenomic source	human gut metagenome
sample derived from	ERS10468679
sequencing method	Illumina

Description: This sample represents a MAG from the metagenomic run ERR8477566

BioProject: PRJEB50699 Oral lyophilised faecal microbiota transplantation in ulcerative colitis shotgun
Retrieve all samples from this project

Metagenome-Assembled Genome (MAG)
Metagenome-Assembled Genome (MAG)

biosample
Cryptospiza jacksoni transforming growth factor beta-2 (TGFB2) gene, partial cds
Cryptospiza jacksoni transforming growth factor beta-2 (TGFB2) gene, partial cds
gi|1818983702|gb|MT051408.1|

Nucleotide
Homo sapiens family with sequence similarity 136 member A (FAM136A), transcript ...
Homo sapiens family with sequence similarity 136 member A (FAM136A), transcript variant 1, mRNA
gi|1676325116|ref|NM_032822.3|

Nucleotide
tx49b01.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2272873 3', mRNA sequence
tx49b01.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2272873 3', mRNA sequence
gi|4891945|gnl|dbEST|2581543|gb|AI6 .1|

Nucleotide

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