Binned metagenome: ERR4304456_bin.48_MetaWRAP_v1.1... - BioSample

Binned metagenome: ERR4304456_bin.48_MetaWRAP_v1.1_bin

Organism: Candidatus Blautia merdipullorum
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Blautia

Attributes

broad-scale environmental context	Chicken digestive system
collection date	2019-09-30
environmental medium	Caecum
geographic location	Spain
investigation type	metagenome-assembled genome
isolation source	chicken gut metagenome
project name	HoloFood Chicken -- MAG Catalogue data
sample name	ERR4304456_bin.48_MetaWRAP_v1.1_bin
ENA-CHECKLIST	ERC000050
ENA-FIRST-PUBLIC	2022-12-22
ENA-LAST-UPDATE	2022-12-22
External Id	SAMEA112266409
INSDC center alias	UNIVERSITY OF COPENHAGEN
INSDC center name	UNIVERSITY OF COPENHAGEN
INSDC first public	2022-12-22T20:22:11Z
INSDC last update	2022-12-22T20:22:11Z
INSDC status	public
Submitter Id	ERR4304456_bin.48_MetaWRAP_v1.1_bin
assembly software	unknown v0.0
binning parameters	MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
binning software	MetaWRAP v1.1
broker name	EMG broker account, EMBL-EBI
completeness score	94.73
completeness software	CheckM
contamination score	0.12
geographic location (latitude)	41.170048
geographic location (longitude)	1.168491
local environmental context	Digestive tube
metagenomic source	chicken gut metagenome
sample derived from	SAMEA7025274
sequencing method	DNBSEQ-G400
taxonomic classification	The taxonomy of this binned metagenome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Clostridia;o__Eubacteriales;f__Lachnospiraceae;g__Blautia;s__Candidatus Blautia merdipullorum
taxonomic identity marker	multi-marker approach

Description: This sample represents a binned metagenome assembled from the metagenomic run ERR4304456 of study ERP122587.