Metagenome-assembled genome: 4-2_110307.39_1677751... - BioSample

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Result Filters

Organism: uncultured Eubacterium sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae; Eubacterium; environmental samples

Attributes

broad-scale environmental context	mouse digestive system
collection date	2012-01-01
environmental medium	feces
geographic location	USA
investigation type	metagenome-assembled genome
isolation source	mouse gut metagenome
project name	A Catalogue of the Mouse Gut Metagenome
sample name	4-2_110307.39_1677751284
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-03-06T00:25:35Z
ENA-LAST-UPDATE	2023-03-06T00:25:35Z
External Id	SAMEA112712011
INSDC center name	HELMHOLTZ CENTRE FOR INFECTION RESEARCH
INSDC first public	2023-03-06T00:25:35Z
INSDC last update	2023-03-06T00:25:35Z
INSDC status	public
Submitter Id	4-2_110307.39_1677751284
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes
binning parameters	default
binning software	metabat2
completeness score	81.75
completeness software	CheckM
contamination score	1.01
geographic location (latitude)	40.70606
geographic location (longitude)	-73.99703
local environmental context	mouse gut
metagenomic source	mouse gut metagenome
sample derived from	SAMEA3134416
scientific_name	uncultured Eubacterium sp.
sequencing method	Illumina HiSeq 2000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Metagenome-assembled genome assembled from the metagenomic run ERR675368 of study ERP008710.

BioProject: PRJEB32890 An integrated metagenome catalog reveals new insights into the murine gut microbiome
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Metagenome-assembled genome: 4-2_110307.39_1677751284
Metagenome-assembled genome: 4-2_110307.39_1677751284

biosample
Homo sapiens apoptosis enhancing nuclease (AEN), mRNA
Homo sapiens apoptosis enhancing nuclease (AEN), mRNA
gi|1519314268|ref|NM_022767.4|

Nucleotide
HN Protein
HN Protein
Glycoprotein from Sendai, para-influenza, Newcastle Disease, and other viruses that participates in binding the virus to cell-surface receptors. The HN protein possesses both ...<br/>Year introduced: 1990

MeSH

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