Metagenome-Assembled Genome: SRR14198835_bin.1_Met... - BioSample

Metagenome-Assembled Genome: SRR14198835_bin.1_MetaWRAP_v1.2.1_MAG

Organism: Malassezia restricta
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Malasseziomycetes; Malasseziales; Malasseziaceae; Malassezia

Attributes

broad-scale environmental context	Human
collection date	2019-02
environmental medium	Human skin
geographic location	USA
investigation type	metagenome-assembled genome
isolation source	skin metagenome
project name	Metagenomes, cultured reference genomes and metagenome assembled genomes Pure cultures
sample name	SRR14198835_bin.1_MetaWRAP_v1.2.1_MAG
ENA-CHECKLIST	ERC000047
INSDC center name	EMG
Submitter Id	SRR14198835_bin.1_MetaWRAP_v1.2.1_MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	not provided
binning parameters	MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
binning software	MetaWRAP v1.2.1
broker name	EBI-EMG
completeness score	94.22
completeness software	CheckM
contamination score	0.92
geographic location (latitude)	38.999838
geographic location (longitude)	-77.106017
local environmental context	Human skin
metagenomic source	skin metagenome
sample derived from	SAMN17584325
scientific_name	Malassezia restricta
sequencing method	Illumina NovaSeq 6000
taxonomic classification	The taxonomy of this Metagenome-Assembled Genome was originally computed with BAT, which assigned the following NCBI taxonomicannotation: 1;131567;2759;33154;4751;451864;5204;452284;1538075;162474;742845;55193;76775
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run SRR14198835 of study SRP314237.

BioProject: PRJEB47281 Skin Microbial Genome Catalogue
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