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OLC2703_Escherichia coli

Identifiers
BioSample: SAMN38336047; Sample name: E-MBS0974A; SRA: SRS19594241
Organism
Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Package
One Health Enteric; version 1.0
Attributes
strainE-MBS0974A
isolateOLC2703
isolate name aliasEC2013AMR1583; OLC2703
collected byCanadian Food Inspection Agency (CFIA) [GENEPIO:0100552]
collection date2012-12-18
culture isolation date41281
geographic locationCanada
isolation sourceAbattoir [ENVO:01000925]; Meat (whole or parts) [FOODON:03317170]; Food (raw) [FOODON:03311126]; Meat (with bone) [FOODON:02010116]; Meat (with skin) [FOODON:02010111]; Gallus gallus [NCBITaxon:9031]; Carcass [UBERON:0008979]
source typefood
sample collection device or methodNot Applicable [GENEPIO:0001619]
purpose of samplingSurveillance [GENEPIO:0100004]
project nameNational Microbiological Baseline Study in Broiler Chicken December 2012 – December 2013
sequenced byPublic Health Agency of Canada (PHAC) [GENEPIO:0100551]
hostChicken [NCBITaxon:9031]
host ageNot Provided [GENEPIO:0001668]
animal environmentAbattoir [ENVO:01000925]
host tissue sampledNot Applicable [GENEPIO:0001619]
host body productNot Applicable [GENEPIO:0001619]
host variety or cultivarNot Applicable [GENEPIO:0001619]
upstream interventionNot Applicable [GENEPIO:0001619]
food product origin geographic locationCanada
food production systemBroiler chicken production stream [FOODON:03000455]
food product typeMeat (whole or parts) [FOODON:03317170]
food sourceChicken [NCBITaxon:9031]
food processing methodFood (raw) [FOODON:03311126]; Meat (with bone) [FOODON:02010116]; Meat (with skin) [FOODON:02010111]
food container or wrappingBag, sack or pouch [FOODON:03490197]
facility typeAbattoir [ENVO:01000925]
environmental mediumNot Applicable [GENEPIO:0001619]
latitude and longitudeMissing
BioProjects
PRJNA1038773 Escherichia coli
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PRJNA966974
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PRJNA514245
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Submission
Canadian Food Inspection Agency, Catherine Carrillo; 2023-11-20
Accession:
SAMN38336047
ID:
38336047

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