One Health Enteric sample from Klebsiella pneumoni... - BioSample - NCBI

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One Health Enteric sample from Klebsiella pneumoniae

Identifiers: BioSample: SAMN41558500; Sample name: CFIA-AMR-2022-0014-OLC4739; SRA: SRS21445012

Organism: Klebsiella pneumoniae
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella

Package: One Health Enteric; version 1.0

Attributes

strain	CFIARB20230075
isolate name alias	OLC4739
collected by	Canadian Food Inspection Agency (CFIA) [GENEPIO:0100552]
collection date	2023-03-20
geographic location	Canada:Ontario
isolation source	Coconut meat [FOODON:00003856]; Ready-to-eat (RTE) [FOODON:03316636]; Food (chunks) [FOODON:00004555]; Food (frozen) [FOODON:03302148]; Retail environment [ENVO:01001448]
source type	food
purpose of sampling	Survey study [GENEPIO:0100582]
project name	WP4.2_ Frozen stone fruit
sequenced by	Canadian Food Inspection Agency (CFIA) [GENEPIO:0100552]
food product origin geographic location	Restricted Access [GENEPIO:0001810]
intended consumer	human as food consumer
food source	Coconut (whole or parts) [FOODON:03309861]
food processing method	Food (shredded) [FOODON:00004553]
food preservation process	Food (frozen) [FOODON:03302148]
food product type	Coconut meat [FOODON:00003856]; Ready-to-eat (RTE) [FOODON:03316636]
food container or wrapping	Plastic bag, sack or pouch [FOODON:03490166]
food quality date	2024-07-15T00:00:00

BioProject: PRJNA107647 Sus scrofa
Retrieve all samples from this project

Submission: Canadian Food Inspection Agency, Ashley Cooper; 2024-05-27

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
cefoxitin	resistant	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftriaxone	resistant	>	64	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	resistant	==	32/16	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	resistant	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
meropenem	susceptible	==	0.06	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
azithromycin	not defined	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	susceptible	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ciprofloxacin	susceptible	==	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
nalidixic acid	susceptible	==	8	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	susceptible	==	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
sulfisoxazole	susceptible	==	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	susceptible	==	0.12/2.38	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
colistin	not defined	==	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN41558500
ID:: 41558500

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