SARS-CoV-2 sequencing of wastewater

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Result Filters

Identifiers: BioSample: SAMN41874287; SRA: SRS21651591; us-cdc-nwss: 0PD00000_05192024

Organism: wastewater metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes

Attributes

sample name	0PD00000_05192024
collection date	2024-05-19
isolation source	wastewater
geographic location	USA: Ohio
wastewater population	24536
wastewater sample duration	24
wastewater sample matrix	raw wastewater
wastewater sample type	composite
wastewater surveillance target 1	SARS-CoV-2
wastewater surveillance target 1 known present	yes
project name	GenomeTrakr; LFFM ww project
collected by	Ohio Department of Health
sequenced by	The Ohio State University Infectious Diseases Institute
wastewater sample site	wastewater treatment plant
wastewater surveillance jurisdiction	oh
wastewater surveillance system sample ID	0PD00000_05192024
wastewater population source	utility provided information
purpose of wastewater sampling	public health surveillance community-level
wastewater surveillance target 1 concentration	29474.0
wastewater surveillance target 1 conc unit	copies/L
wastewater surveillance target 1 gene	N gene (N2)
wastewater surveillance target 1 protocol	GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR
wastewater flow	7479973.685
collection_site_id	OH0023931
concentration_method	ceres nanotrap
extraction_method	qiagen allprep powerviral dna/rna kit
extraction_control	bcov vaccine