10C-St8-MC-01_bin.5.orig

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Result Filters

Organism: uncultured Myxococcota bacterium
cellular organisms; Bacteria; Myxococcota; environmental samples

Attributes

broad-scale environmental context	polar environment [ENVO:01001703]
collection date	2019-09-10
environmental medium	marine sediment [ENVO:03000033]
geographic location	Arctic Ocean
isolation source	marine sediment
project name	Marine sediment microbiomes in East Siberian Sea
sample name	10C-St8-MC-01_bin.5.orig
ENA first public	2024-07-04
ENA-CHECKLIST	ERC000047
INSDC center name	KOPRI
INSDC status	public
Submitter Id	10C-St8-MC-01_bin.5.orig
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software	MEGAHIT (v1.2.9)
binning parameters	completeness > 70%, contamination > 10%
binning software	MaxBin2 (v2.2.6), MetaBAT2 (v2.12.1), CONCOCT (v1.0.0)
completeness score	92.1
completeness software	CheckM (v1.2.2)
contamination score	3.08
geographic location (latitude)	73.6961
geographic location (longitude)	167.6757
local environmental context	seafloor [ENVO:00000482]
metagenomic source	marine sediment metagenome
sample derived from	ERS20273661
scientific_name	uncultured Myxococcota bacterium
taxonomic identity marker	multi marker approach