SARS-CoV-2 sequencing of wastewater

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN42658768; SRA: SRS22060100; us-cdc-nwss: 0PD00009_05232024

Organism: wastewater metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes

Attributes

sample name	0PD00009_05232024
collection date	2024-05-23
isolation source	wastewater
geographic location	USA: Ohio
wastewater population	8500
wastewater sample duration	24
wastewater sample matrix	raw wastewater
wastewater sample type	composite
wastewater surveillance target 1	SARS-CoV-2
wastewater surveillance target 1 known present	no
project name	GenomeTrakr; LFFM ww project
collected by	Ohio Department of Health
sequenced by	The Ohio State University Infectious Diseases Institute
wastewater sample site	wastewater treatment plant
wastewater surveillance jurisdiction	oh
wastewater surveillance system sample ID	0PD00009_05232024
wastewater population source	utility provided information
purpose of wastewater sampling	public health surveillance community-level
wastewater surveillance target 1 concentration	6500.0
wastewater surveillance target 1 conc unit	copies/L
wastewater surveillance target 1 gene	N gene (N2)
wastewater surveillance target 1 protocol	GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR
wastewater flow	3743772.254
collection_site_id	OH0023388
concentration_method	ceres nanotrap
extraction_method	qiagen allprep powerviral dna/rna kit
extraction_control	bcov vaccine

BioProject: PRJNA896645 wastewater metagenome
Retrieve all samples from this project

SARS-CoV-2 sequencing of wastewater
SARS-CoV-2 sequencing of wastewater

biosample
transcription factor 19 [Homo sapiens]
transcription factor 19 [Homo sapiens]
gi|117414152|ref|NP_001070979.1|

Protein
Homo sapiens replication factor C subunit 4 (RFC4), transcript variant 1, mRNA
Homo sapiens replication factor C subunit 4 (RFC4), transcript variant 1, mRNA
gi|31881681|ref|NM_002916.3|

Nucleotide
qd90b05.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1736721 3', mRNA sequ...
qd90b05.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1736721 3', mRNA sequence
gi|3594094|gnl|dbEST|1884102|gb|AI1 .1|

Nucleotide
Dnali1 dynein, axonemal, light intermediate chain 1 [Rattus norvegicus]
Dnali1 dynein, axonemal, light intermediate chain 1 [Rattus norvegicus]
Gene ID:298524

Gene

Your browsing activity is empty.

Activity recording is turned off.

You are here: NCBI > DNA & RNA > BioSample