SARS-CoV-2: wastewater surveillance

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Result Filters

Identifiers: BioSample: SAMN44654065; Sample name: WA1024270; SRA: SRS23166116

Organism: wastewater metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes

Attributes

collection date	2024-10-28
geographic location	USA: Washington
isolation source	wastewater
project name	CDC NWSS
collected by	Washington State Department of Health
purpose of wastewater sampling	public health surveillance community-level
wastewater sample site	wastewater treatment plant
wastewater flow	3.2
wastewater population	35550
wastewater sample matrix	raw wastewater
wastewater sample type	composite
wastewater sample duration	Not Collected
wastewater temperature	Not Collected
wastewater pH	Not Collected
wastewater industrial effluent percent	50
wastewater total suspended solids	Not Collected
wastewater surveillance system sample ID	240500
wastewater pre-treatment	No
wastewater surveillance target 1	SCBS-CoV-2
wastewater surveillance target 1 known present	yes
wastewater surveillance target 1 protocol	Multiplex SARS-Flu-RSV-Mpox dPCR
wastewater surveillance target 1 concentration	863000
wastewater surveillance target 1 conc unit	Copies/L
wastewater surveillance target 1 gene	N
wastewater surveillance target 2	Not applicable
purpose of wastewater sequencing	Community Surveillance
sequenced by	Washington State Department of Health
collection_time	00:00:00
collection_site_id	WA0023949
instantaneous_flow	See ww_flow
collection_volume	50 mL
concentration_method	Ceres Nanotrap
extraction_method	MagMAX Viral/Pathogen Nucleic Acid Isolation Kit
extraction_control	OC43 Recovery Control

SARS-CoV-2: wastewater surveillance
SARS-CoV-2: wastewater surveillance

biosample
Pluvianellus socialis mitochondrion, partial genome
Pluvianellus socialis mitochondrion, partial genome
gi|1910804685|gb|MN356314.1|

Nucleotide

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