SARS-CoV-2: wastewater surveillance

Identifiers: BioSample: SAMN44654067; Sample name: WA1024703; SRA: SRS23166118

Organism: wastewater metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes

Attributes

collection date	2024-10-30
geographic location	USA: Washington
isolation source	wastewater
project name	CDC NWSS
collected by	Washington State Department of Health
purpose of wastewater sampling	public health surveillance community-level
wastewater sample site	wastewater treatment plant
wastewater flow	17.89
wastewater population	288000
wastewater sample matrix	raw wastewater
wastewater sample type	composite
wastewater sample duration	3
wastewater temperature	6
wastewater pH	Not Collected
wastewater industrial effluent percent	10.8
wastewater total suspended solids	Not Collected
wastewater surveillance system sample ID	241493
wastewater pre-treatment	Yes
wastewater surveillance target 1	SCBS-CoV-2
wastewater surveillance target 1 known present	yes
wastewater surveillance target 1 protocol	Multiplex SARS-Flu-RSV-Mpox dPCR
wastewater surveillance target 1 concentration	1389000
wastewater surveillance target 1 conc unit	Copies/L
wastewater surveillance target 1 gene	N
wastewater surveillance target 2	Not applicable
purpose of wastewater sequencing	Community Surveillance
sequenced by	Washington State Department of Health
collection_time	06:00:00
collection_site_id	WA0032247
instantaneous_flow	See ww_flow
collection_volume	50 mL
concentration_method	Ceres Nanotrap
extraction_method	MagMAX Viral/Pathogen Nucleic Acid Isolation Kit
extraction_control	OC43 Recovery Control

BioSample