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SARS-CoV-2: wastewater surveillance

Identifiers
BioSample: SAMN44654071; Sample name: WA1024719; SRA: SRS23166111
Organism
wastewater metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
Package
SARS-CoV-2: wastewater surveillance; version 1.0
Attributes
collection date2024-10-28
geographic locationUSA: Washington
isolation sourcewastewater
project nameCDC NWSS
collected byWashington State Department of Health
purpose of wastewater samplingpublic health surveillance community-level
wastewater sample sitewastewater treatment plant
wastewater flow7.46
wastewater population162100
wastewater sample matrixraw wastewater
wastewater sample typecomposite
wastewater sample duration9
wastewater temperature3
wastewater pHNot Collected
wastewater industrial effluent percent19
wastewater total suspended solidsNot Collected
wastewater surveillance system sample ID240707
wastewater pre-treatmentNo
wastewater surveillance target 1SCBS-CoV-2
wastewater surveillance target 1 known presentyes
wastewater surveillance target 1 protocolMultiplex SARS-Flu-RSV-Mpox dPCR
wastewater surveillance target 1 concentration2345000
wastewater surveillance target 1 conc unitCopies/L
wastewater surveillance target 1 geneN
wastewater surveillance target 2Not applicable
purpose of wastewater sequencingCommunity Surveillance
sequenced byWashington State Department of Health
collection_time23:50:00
collection_site_idWA0024368
instantaneous_flowSee ww_flow
collection_volume50 mL
concentration_methodCeres Nanotrap
extraction_methodMagMAX Viral/Pathogen Nucleic Acid Isolation Kit
extraction_controlOC43 Recovery Control
Submission
WA_GT; 2024-11-08
Accession:
SAMN44654071
ID:
44654071

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