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Uncultivated Leuconostoc sp. UBA4400 genome recovered from SRX822757

Identifiers
BioSample: SAMN06451891; Sample name: Leuconostoc sp. UBA4400; SRA: SRS2039190
Organism
Leuconostoc sp. UBA4400
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Leuconostoc; unclassified Leuconostoc
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA4400
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822757 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated88.38%
contamination_estimated0.53%
environmental_sampletrue
genome_coverage9.43
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749374.
Description

Uncultivated genome recovered from an assembly of the SRX822757 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451891
ID:
6451891

BioProject SRA Nucleotide

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