U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Coriell GM12874

Identifiers
BioSample: SAMN00801880; SRA: SRS000089; Coriell: GM12874; 1000G: NA12874; HapMap: NA12874
Organism
Homo sapiens (human)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo
Attributes
family id1459
raceCaucasian
family rolematernal grandfather
cell lineGM12874
Population DescriptionUtah Residents (CEPH) with Northern and Western European ancestry
cell typeB-Lymphocyte
Super Population DescriptionEuropean
karyotype46;XY
Super Population CodeEUR
culture collectionCoriell:GM12874
ethnicityUTAH/MORMON
populationCEU
sexmale
Coriell plateHAPMAPPT01
DNA-IDNA12874
collectionNIGMS Human Genetic Cell Repository
HapMap sample IDNA12874
Tags
International hapmap project - ceph (plate i) utah residents with ancestry from northern and western europe
Description

Maternal Grandfather;Same as 1458-10;donor subject has a single bp (G-to-A) transition at nucleotide 681 in exon 5 of the CYP2C19 gene (CYP2C19*2) which creates an aberrant splice site. The change altered the reading frame of the mRNA starting with amino acid 215 and produced a premature stop codon 20 amino acids downstream;resulting in a truncated;nonfunctional protein. Because of the aberrant splice site;a 40-bp deletion occurred at the beginning of exon 5 (from bp 643 to bp 682);resulting in deletion of amino acids 215 to 227. The truncated protein had 234 amino acids and would be catalytically inactive because it lacked the heme-binding region.

Links
dbSNP Batch ID 1061891
Submission
Coriell; 2012-03-05
Accession:
SAMN00801880
ID:
801880

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center