Microbe sample from Hydrogenobaculum sp. - BioSample - NCBI

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Microbe sample from Hydrogenobaculum sp.

Identifiers: BioSample: SAMN09638904; Sample name: Uncultivated Hydrogenobaculum sp. SpSt-1007 genome recovered from SRR6049666; SRA: SRS3740936

Organism: Hydrogenobaculum sp.
cellular organisms; Bacteria; Aquificota; Aquificia; Aquificales; Aquificaceae; Hydrogenobaculum; unclassified Hydrogenobaculum

Package: Microbe; version 1.0

Attributes

isolate	SpSt-1007
isolation source	mud, sediment
collection date	2012-10-12
geographic location	USA: Yellowstone National Park
sample type	metagenomic assembly
latitude and longitude	44.6100 N 110.4400 W
subsource note	Metagenome-assembled genome binned from sequencing reads available in SRR6049666
metagenome source	hot springs metagenome
assembly_method_and_version	DOE-JGI IMG deposited assembly (IMG Genome ID: 3300009503)
completeness_estimated	72.43
contamination_estimated	0.97
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	5.22
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA480137 metagenomes
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-07-11

Accession:: SAMN09638904
ID:: 9638904

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