Microbe sample from Porticoccaceae bacterium - BioSample - NCBI

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Microbe sample from Porticoccaceae bacterium

Identifiers: BioSample: SAMN09926400; Sample name: Uncultivated Porticoccaceae bacterium SZUA-1241 genome recovered from SRR1217367 SRR1217459 SRR1217564 SRR1217566; SRA: SRS3745426

Organism: Porticoccaceae bacterium
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Porticoccaceae; unclassified Porticoccaceae

Package: Microbe; version 1.0

Attributes

isolate	SZUA-1241
isolation source	Kilo Moana Hydrothermal plume 60m
collection date	2009-06-15
geographic location	Pacific Ocean:Lau Basin
sample type	metagenomic assembly
latitude and longitude	20.05382503 S 176.13358938 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217367 SRR1217459 SRR1217564 SRR1217566
metagenome source	hydrothermal vent metagenome
assembly_method_and_version	MEGAHIT v1.1.2
completeness_estimated	68.18
contamination_estimated	0.93
quality_assessment_method_and_version	CheckM v1.0.7
environmental-sample	true
genome_coverage	2.99
mapping_method_and_version	Bowtie 2 v2.2.8
metagenomic	true

BioProject: PRJNA488180 hydrothermal vent metagenome
Retrieve all samples from this project

Submission: The University of Hong Kong, Zhichao Zhou; 2018-08-28

Accession:: SAMN09926400
ID:: 9926400

BioProject SRA Nucleotide

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Microbe sample from Porticoccaceae bacterium
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