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MIGS Cultured Bacterial/Archaeal sample from Haemophilus sputorum HK 2154

Identifiers
BioSample: SAMN00829138; Sample name: HMPREF1128; SRA: SRS301833
Organism
Haemophilus sputorum HK 2154
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus sputorum
Attributes
collection datenot determined
estimated size2080000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
broad-scale environmental contextterrestrial biome [ENVO:00000446]
investigation typemissing
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project nameHaemophilus sputorum sp.nov. HK2154
geographic locationnot determined
source material identifiersnot determined
environmental mediumbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainHK 2154
environmental packagemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft30x;25
project_typeReference Genome
misc_param: HMP body siteBlood
nucleic acid extractionnot determined
assemblyCA v6.1
misc_param: HMP supersiteother
sequencing methodIllumina HiSeq 2000
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
BioSampleModelGeneric
Description

Illumina Paired-Ends

BioProject
PRJNA89619 Haemophilus sputorum HK 2154
Retrieve all samples from this project

Submission
JCVI; 2012-03-20
Accession:
SAMN00829138
ID:
829138

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