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MIGS Cultured Bacterial/Archaeal sample from Haemophilus paraphrohaemolyticus HK411

Identifiers
BioSample: SAMN00761819; Sample name: HMPREF1054; SRA: SRS281658
Organism
Haemophilus paraphrohaemolyticus HK411
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus paraphrohaemolyticus
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
collection datenot determined
estimated sizenot determined
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
broad-scale environmental contextterrestrial biome [ENVO:00000446]
investigation typemissing
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project nameHaemophilus paraphrohaemolyticus HK411, NCTC 10670
geographic locationnot determined
source material identifiersNCTC 10670
environmental mediumbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainHK411
environmental packagemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft32.77x;78
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 2.6
misc_param: HMP supersiteairways
sequencing methodnot determined
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Illumina Paired-Ends

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA75147 Haemophilus paraphrohaemolyticus HK411
Retrieve all samples from this project

Submission
JCVI; 2011-12-05
Accession:
SAMN00761819
ID:
761819

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