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USDA-ARS-USMARC-184 grown in Brain Heart Infusion Broth

Identifiers
BioSample: SAMN03275447; GenBank: gb|CP006957
Organism
Mannheimia haemolytica USDA-ARS-USMARC-184
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica
Package
MIGS: cultured bacteria/archaea, host-associated; version 6.0
Attributes
investigation typebacteria_archaea
broad-scale environmental contextlivestock-associated habitat
collection date2008-04-08
local-scale environmental contextlivestock-associated habitat
geographic locationUSA: Kansas
health stateNot available
isolation and growth conditionNot available
latitude and longitudeNot available
environmental mediummucus
pathogenicityanimal
ploidyhaploid
project nameUSMARC Bovine Respiratory Disease Pathogen Sequencing
reference for biomaterialNot available
sample collection device or methodNot available
encoded traitsSerotype A2
strainUSDA-ARS-USMARC-184
number of replicons1
observed biotic relationshipcommensal
estimated size2500000
hostBos taurus
annot_sourceDIYA
assemblyCelera Assembler v. 7.0 : Consensus accuracy 99.9982% : Quiver v. 1
finishing_strategycomplete : 10X coverage : reads >=10,000
seq_methPac Bio RS C2 Long Read
Description

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA172854 Mannheimia haemolytica
Retrieve all samples from this project

Submission
USDA-ARS-U.S. Meat Animal Research Center, Genetics, Breeding, and Animal Health Research Unit; 2015-01-05
Accession:
SAMN03275447
ID:
3275447

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