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Uncultivated Clostridium sp. UBA6653 genome recovered from SRX822461

Identifiers
BioSample: SAMN06456163; Sample name: Clostridium sp. UBA6653; SRA: SRS2038928
Organism
Clostridium sp. UBA6653
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium; unclassified Clostridium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA6653
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822461 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated88.86%
contamination_estimated3.56%
environmental_sampletrue
genome_coverage5.98
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749078.
Description

Uncultivated genome recovered from an assembly of the SRX822461 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456163
ID:
6456163

BioProject SRA Nucleotide

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