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Uncultivated Hydrogenovibrio sp. UBA1537 genome recovered from SRX667739

Identifiers
BioSample: SAMN06454587; Sample name: Hydrogenovibrio sp. UBA1537; SRA: SRS2035554
Organism
Hydrogenovibrio sp. UBA1537
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio; unclassified Hydrogenovibrio
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Crystal Geyser near Green River, Utah
isolateUBA1537
isolation sourcewater
metagenome sourcegroundwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX667739 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.39%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage695.61
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1534154.
Description

Uncultivated genome recovered from an assembly of the SRX667739 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454587
ID:
6454587

BioProject SRA Nucleotide

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