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Uncultivated Leclercia sp. UBA5076 genome recovered from SRX836037

Identifiers
BioSample: SAMN06454968; Sample name: Leclercia sp. UBA5076; SRA: SRS2035497
Organism
Leclercia sp. UBA5076
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Leclercia; unclassified Leclercia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5076
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX836037 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.11%
contamination_estimated0.45%
environmental_sampletrue
genome_coverage25.79
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748651.
Description

Uncultivated genome recovered from an assembly of the SRX836037 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454968
ID:
6454968

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