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Uncultivated Proteobacteria bacterium UBA1270 genome recovered from ERX289008

Identifiers
BioSample: SAMN06456931; Sample name: Proteobacteria bacterium UBA1270; SRA: SRS2030588
Organism
Proteobacteria bacterium UBA1270
cellular organisms; Bacteria; Pseudomonadota; unclassified Pseudomonadota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1270
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX289008 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated84.87%
contamination_estimated5.00%
environmental_sampletrue
genome_coverage10.38
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR315860.
Description

Uncultivated genome recovered from an assembly of the ERX289008 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456931
ID:
6456931

BioProject SRA Nucleotide

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