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Uncultivated Dehalococcoidia bacterium UBA1141 genome recovered from SRX1075082

Identifiers
BioSample: SAMN06452090; Sample name: Dehalococcoidia bacterium UBA1141; SRA: SRS2032134
Organism
Dehalococcoidia bacterium UBA1141
cellular organisms; Bacteria; Terrabacteria group; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAtlantic Ocean:Mid Cayman Rise
isolateUBA1141
isolation sourceBeebe hydrothermal vent plume at at depth of 4900m
metagenome sourcehydrothermal vent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1075082 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.84%
contamination_estimated1.98%
environmental_sampletrue
genome_coverage19.75
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome reads: SRR2080393.
Description

Uncultivated genome recovered from an assembly of the SRX1075082 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452090
ID:
6452090

BioProject SRA Nucleotide

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