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Uncultivated Dehalococcoidia bacterium UBA4462 genome recovered from SRX802075

Identifiers
BioSample: SAMN06452117; Sample name: Dehalococcoidia bacterium UBA4462; SRA: SRS2036329
Organism
Dehalococcoidia bacterium UBA4462
cellular organisms; Bacteria; Terrabacteria group; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Coal Oil Point, Santa Barbara, California
isolateUBA4462
isolation sourceOil polluted marine water
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX802075 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated79.37%
contamination_estimated0.44%
environmental_sampletrue
genome_coverage10.89
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1699482.
Description

Uncultivated genome recovered from an assembly of the SRX802075 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452117
ID:
6452117

BioProject SRA Nucleotide

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