U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Dehalococcoidia bacterium UBA5164 genome recovered from ERX555992

Identifiers
BioSample: SAMN06456309; Sample name: Dehalococcoidia bacterium UBA5164; SRA: SRS2031312
Organism
Dehalococcoidia bacterium UBA5164
cellular organisms; Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA5164
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX555992 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.34%
contamination_estimated1.98%
environmental_sampletrue
genome_coverage25.52
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599112.
Description

Uncultivated genome recovered from an assembly of the ERX555992 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456309
ID:
6456309

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center