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Uncultivated Patescibacteria group bacterium UBA2773 genome recovered from SRX560108

Identifiers
BioSample: SAMN06451503; Sample name: Patescibacteria group bacterium UBA2773; SRA: SRS2034349
Organism
Patescibacteria group bacterium UBA2773
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; unclassified Patescibacteria group
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Coal Oil Point, Santa Barbara, California
isolateUBA2773
isolation sourceOil polluted marine water
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX560108 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated65.06%
contamination_estimated1.12%
environmental_sampletrue
genome_coverage32.44
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1313734.
Description

Uncultivated genome recovered from an assembly of the SRX560108 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451503
ID:
6451503

BioProject SRA Nucleotide

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