U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Bacteroidales bacterium UBA5206 genome recovered from SRX559902

Identifiers
BioSample: SAMN06456146; Sample name: Bacteroidales bacterium UBA5206; SRA: SRS2034253
Organism
Bacteroidales bacterium UBA5206
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; unclassified Bacteroidales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Fort McMurray, Alberta
isolateUBA5206
isolation sourcebiofilm
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX559902 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.89%
contamination_estimated4.21%
environmental_sampletrue
genome_coverage17.08
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR1313269,SRR1313278,SRR1313272,SRR1313274,SRR1313275,SRR1313277.
Description

Uncultivated genome recovered from an assembly of the SRX559902 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456146
ID:
6456146

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center