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Uncultivated Lachnospiraceae bacterium UBA3404 genome recovered from ERX166941

Identifiers
BioSample: SAMN06453228; Sample name: Lachnospiraceae bacterium UBA3404; SRA: SRS2030418
Organism
Lachnospiraceae bacterium UBA3404
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; unclassified Lachnospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3404
isolation sourcedigestive tract (UBERON:0001555); intestine (UBERON:0000160)
metagenome sourcemouse gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX166941 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.29%
contamination_estimated1.44%
environmental_sampletrue
genome_coverage31.82
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the mouse gut metagenome reads: ERR192252.
Description

Uncultivated genome recovered from an assembly of the ERX166941 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453228
ID:
6453228

BioProject SRA Nucleotide

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