U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Porphyromonadaceae bacterium UBA7108 genome recovered from SRX803755

Identifiers
BioSample: SAMN06457487; Sample name: Porphyromonadaceae bacterium UBA7108; SRA: SRS2038354
Organism
Porphyromonadaceae bacterium UBA7108
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA7108
isolation sourcerat gut
metagenome sourcerat gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX803755 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated64.22%
contamination_estimated0.94%
environmental_sampletrue
genome_coverage24.72
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702557.
Description

Uncultivated genome recovered from an assembly of the SRX803755 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457487
ID:
6457487

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center