U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Syntrophaceae bacterium UBA2210 genome recovered from SRX327722

Identifiers
BioSample: SAMN06454040; Sample name: Syntrophaceae bacterium UBA2210; SRA: SRS2033444
Organism
Syntrophaceae bacterium UBA2210
cellular organisms; Bacteria; Thermodesulfobacteriota; Syntrophia; Syntrophales; Syntrophaceae; unclassified Syntrophaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Suncor tailings pond 6
isolateUBA2210
isolation sourcesuncor tailing pond 6 meters
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327722 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated89.65%
contamination_estimated2.58%
environmental_sampletrue
genome_coverage26.93
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943330,SRR943329,SRR942941,SRR943334,SRR943332,SRR943333,SRR943331.
Description

Uncultivated genome recovered from an assembly of the SRX327722 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454040
ID:
6454040

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center