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MIGS Cultured Bacterial/Archaeal sample from Escherichia coli MS 175-1

Identifiers
BioSample: SAMN00189173; Sample name: 71155; SRA: SRS150855
Organism
Escherichia coli MS 175-1
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Package
MIGS: cultured bacteria/archaea; version 6.0
Attributes
collection datenot determined
estimated size4673000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
broad-scale environmental contextterrestrial biome [ENVO:00000446]
investigation typemissing
local-scale environmental contexthuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project nameEscherichia coli MS 175-1
geographic locationnot determined
source material identifiersBEI HM-361
environmental mediumbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainMS 175-1
environmental packagemissing
isolation sourcemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft63.5x;413
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyVelvet v. 0.7.57
misc_param: HMP supersitegastrointestinal_tract
sequencing methodIllumina
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Sample Type : genomic dna

Keywords: GSC:MIxS;MIGS:6.0

BioProject
PRJNA47263 Escherichia coli MS 175-1
Retrieve all samples from this project

Submission
WUGSC; 2010-12-23
Accession:
SAMN00189173
ID:
189173

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