bin.111 MAG

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Result Filters

Organism: Methanobacteriota archaeon
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; unclassified Methanobacteriota

Attributes

broad-scale environmental context	ENVO_01000023
collection date	2011-07-02
environmental medium	ENVO_00002006
geographic location	Atlantic Ocean
isolation source	North Atlantic
project name	GEN_BGC Atlantic-Pacific 2011
sample name	bin.111 MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-03-06
ENA-LAST-UPDATE	2023-03-06
External Id	SAMEA112746641
INSDC center alias	IDAEA-CSIC
INSDC center name	IDAEA-CSIC
INSDC first public	2023-03-06T08:21:11Z
INSDC last update	2023-03-06T08:21:11Z
INSDC status	public
Submitter Id	bin.111 MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	MEGAHIT
binning parameters	default
binning software	MetaBAT2
completeness score	85.94
completeness software	CheckM
contamination score	1.66
geographic location (latitude)	23.766
geographic location (longitude)	-41.918
local environmental context	ENVO_01000035
metagenomic source	marine metagenome
sample derived from	ERS14678684,ERS14678685,ERS14678686,ERS14678687,ERS14678688,ERS14678689,ERS14678690,ERS14678691,ERS14678692,ERS14678693,ERS14678694,ERS14678695
scientific_name	Euryarchaeota archaeon
taxonomic identity marker	GTDB-Tk ar53

BioProject: PRJEB60184 Responses to organic pollutants in the tropical Pacific and subtropical Atlantic oceans by pelagic marine bacteria
Retrieve all samples from this project

bin.111 MAG
bin.111 MAG

biosample
MAG: Prochlorococcus marinus str. MIT 9215 isolate bin.404 MAG, whole genome sho...
MAG: Prochlorococcus marinus str. MIT 9215 isolate bin.404 MAG, whole genome shotgun sequencing project
gi|2475766265|emb|CATBLW000000000.1 LW010000000

Nucleotide
MAG: SAR92 bacterium MED-G29 isolate bin.902 MAG, whole genome shotgun sequencin...
MAG: SAR92 bacterium MED-G29 isolate bin.902 MAG, whole genome shotgun sequencing project
gi|2476647380|emb|CATIRQ000000000.1 RQ010000000

Nucleotide
MAG: Euryarchaeota archaeon isolate bin.111 MAG, whole genome shotgun sequencing...
MAG: Euryarchaeota archaeon isolate bin.111 MAG, whole genome shotgun sequencing project
gi|2475501922|emb|CATFLP000000000.1 LP010000000

Nucleotide
MAG: Euryarchaeota archaeon isolate bin.395 MAG, whole genome shotgun sequencing...
MAG: Euryarchaeota archaeon isolate bin.395 MAG, whole genome shotgun sequencing project
gi|2475915538|emb|CATCZX000000000.1 ZX010000000

Nucleotide

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