U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Metagenome-assembled genome: SRS17165154__bin49

Identifiers
BioSample: SAMEA114501267; SRA: ERS16482919
Organism
uncultured Bulleidia sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia; environmental samples
Attributes
broad-scale environmental contexthost-associated habitat
collection date2021
environmental mediumfeces
geographic locationChina
investigation typemetagenome-assembled genome
isolation sourcecat gut
project namecat_mags
sample nameSRS17165154__bin49
ENA-CHECKLISTERC000050
ENA-FIRST-PUBLIC2023-10-21T00:32:41Z
ENA-LAST-UPDATE2023-10-21T00:32:41Z
External IdSAMEA114501267
INSDC center aliasINRA-META
INSDC center nameInstitut National pour la Recherche Agronomique (FRANCE)
INSDC first public2023-10-21T00:32:41Z
INSDC last update2023-10-21T00:32:41Z
INSDC statuspublic
Submitter IdSRS17165154__bin49
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareSPAdes 3.15.5
binning parametersCOMEBin defaults.
binning softwareCOMEBin v1.0.0
completeness score98.45
completeness softwareCheckM2
contamination score0.42
geographic location (latitude)0.0
geographic location (longitude)0.0
local environmental contexthost-associated habitat
metagenomic sourcegut metagenome
sample derived fromSRS17165154
scientific_nameuncultured Bulleidia sp.
sequencing methodIllumina NovaSeq 6000
taxonomic identity markermulti-marker approach
Description

This sample represents a metagenomic bin from the metagenomic sample SRS17165154

BioProject
PRJEB67522
Retrieve all samples from this project

Submission
EBI; 2023-10-22
Accession:
SAMEA114501267
ID:
37917198

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center