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Metagenome-assembled genome: SRS16461583__bin8

Identifiers
BioSample: SAMEA114501554; SRA: ERS16483206
Organism
Bilophila wadsworthia
cellular organisms; Bacteria; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Bilophila
Attributes
broad-scale environmental contexthost-associated habitat
collection date2022
environmental mediumfeces
geographic locationUSA
investigation typemetagenome-assembled genome
isolation sourcecat gut
project namecat_mags
sample nameSRS16461583__bin8
ENA-CHECKLISTERC000050
ENA-FIRST-PUBLIC2023-10-21T00:32:40Z
ENA-LAST-UPDATE2023-10-21T00:32:40Z
External IdSAMEA114501554
INSDC center aliasINRA-META
INSDC center nameInstitut National pour la Recherche Agronomique (FRANCE)
INSDC first public2023-10-21T00:32:40Z
INSDC last update2023-10-21T00:32:40Z
INSDC statuspublic
Submitter IdSRS16461583__bin8
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareSPAdes 3.15.5
binning parametersCOMEBin defaults.
binning softwareCOMEBin v1.0.0
completeness score95.56
completeness softwareCheckM2
contamination score4
geographic location (latitude)0.0
geographic location (longitude)0.0
local environmental contexthost-associated habitat
metagenomic sourcegut metagenome
sample derived fromSRS16461583
scientific_nameBilophila wadsworthia
sequencing methodIllumina NovaSeq 6000
taxonomic identity markermulti-marker approach
Description

This sample represents a metagenomic bin from the metagenomic sample SRS16461583

BioProject
PRJEB67522
Retrieve all samples from this project

Submission
EBI; 2023-10-22
Accession:
SAMEA114501554
ID:
37917252

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