07C-BC-St02_bin.8.orig

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Result Filters

Organism: uncultured Gemmatimonadales bacterium
cellular organisms; Bacteria; FCB group; Gemmatimonadota; Gemmatimonadia; Gemmatimonadales; environmental samples

Attributes

broad-scale environmental context	polar environment [ENVO:01001703]
collection date	2016-09-02
environmental medium	marine sediment [ENVO:03000033]
geographic location	Arctic Ocean
isolation source	marine sediment
project name	Marine sediment microbiomes in East Siberian Sea
sample name	07C-BC-St02_bin.8.orig
ENA first public	2024-07-04
ENA-CHECKLIST	ERC000047
INSDC center name	KOPRI
INSDC status	public
Submitter Id	07C-BC-St02_bin.8.orig
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software	MEGAHIT (v1.2.9)
binning parameters	completeness > 70%, contamination > 10%
binning software	MaxBin2 (v2.2.6), MetaBAT2 (v2.12.1), CONCOCT (v1.0.0)
completeness score	97.8
completeness software	CheckM (v1.2.2)
contamination score	3.3
geographic location (latitude)	76.7476
geographic location (longitude)	174.261
local environmental context	seafloor [ENVO:00000482]
metagenomic source	marine sediment metagenome
sample derived from	ERS20273656
scientific_name	uncultured Gemmatimonadales bacterium
taxonomic identity marker	multi marker approach