Metagenome-assembled genome: ERR1855284_bin.42_CON... - BioSample

Metagenome-assembled genome: ERR1855284_bin.42_CONCOCT_v1.1_MAG

Organism: uncultured Microbacteriaceae bacterium
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae; environmental samples

Attributes

collection date	2015-09-11
broad-scale environmental context	Environmental
local-scale environmental context	Aquatic
environmental medium	Marine
geographic location	Arctic Ocean
investigation type	metagenome-assembled genome
isolation source	marine metagenome
project name	Arctic Ocean metagenomes sampled aboard CGC Healy during the 2015 GEOTRACES Arctic research cruise
sample name	ERR1855284_bin.42_CONCOCT_v1.1_MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-01-03
ENA-LAST-UPDATE	2023-01-03
External Id	SAMEA14074679
INSDC center alias	EBI
INSDC center name	European Bioinformatics Institute
INSDC first public	2023-01-03T00:32:35Z
INSDC last update	2023-01-03T00:32:35Z
INSDC status	public
Submitter Id	ERR1855284_bin.42_CONCOCT_v1.1_MAG
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software	metaspadesv3.11.1
binning parameters	Default
binning software	CONCOCT v1.1
broker name	EMG broker account, EMBL-EBI
completeness score	96.93
completeness software	CheckM
contamination score	0.58
geographic location (latitude)	87.77202
geographic location (longitude)	-148.89433
metagenomic source	marine metagenome
sample derived from	SAMEA98140918
scientific_name	uncultured Microbacteriaceae bacterium
sequencing method	Illumina MiSeq
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR1855284 of study ERP015773.

BioProject: PRJEB51078 Large-scale analysis of novel cellular microbes from the marine biome
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