Metagenome-assembled genome: SRR6823441_bin.196_CO... - BioSample

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Result Filters

Organism: Candidatus Helarchaeota archaeon
cellular organisms; Archaea; Asgard group; Candidatus Helarchaeota; unclassified Candidatus Helarchaeota

Attributes

collection date	2009-11-30
broad-scale environmental context	Environmental
local-scale environmental context	Aquatic
environmental medium	Marine
geographic location	Mexico
investigation type	metagenome-assembled genome
isolation source	marine metagenome
project name	Subseafloor sediment microbial communities from the background core at a depth of 12-15 cm, 2000m below sea level
sample name	SRR6823441_bin.196_CONCOCT_v1.1_MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-01-03
ENA-LAST-UPDATE	2023-01-03
External Id	SAMEA14075605
INSDC center alias	EBI
INSDC center name	European Bioinformatics Institute
INSDC first public	2023-01-03T00:32:29Z
INSDC last update	2023-01-03T00:32:29Z
INSDC status	public
Submitter Id	SRR6823441_bin.196_CONCOCT_v1.1_MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaspadesv3.11.1
binning parameters	Default
binning software	CONCOCT v1.1
broker name	EMG broker account, EMBL-EBI
completeness score	91.74
completeness software	CheckM
contamination score	6.15
geographic location (latitude)	27.0154
geographic location (longitude)	-111.3798
metagenomic source	marine metagenome
sample derived from	SAMN07632362
scientific_name	Candidatus Helarchaeota archaeon
sequencing method	Illumina HiSeq 2500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR6823441 of study SRP134683.