Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Isoodon obesulus affinis
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Isoodon; Isoodon obesulus

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	40120
sex	male
sub species	affinis
tissue	heart
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/1f11659d-ff5a-472d-b98e-7f01b6526877
BPA_library_ID	52751
BPA_sample_ID	40120
CALLABLE	547471
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:27Z
ENA-LAST-UPDATE	2020-09-25T00:34:28Z
External Id	SAMEA7321025
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:27Z
INSDC last update	2020-09-25T00:34:28Z
INSDC status	public
LOW_COVERAGE	57005
NO_COVERAGE	464
ReadLength	100bp
Submitter Id	40120
TCCP_ID	40120_LANES3
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Southern brown bandicoot
decimal_latitude	-41.08
decimal_longitude	145.92
depthmean	102.73
depthmedian	25
family	Peramelidae
genus	Isoodon
geographic location (region and locality)	Tasmania
institution_name	Australian National Wildlife Collection
location_text	Fern Glade Road, Emu River Crossing, Burnie
order	Peramelemorphia
phylum	Chordata
scientific_name	Isoodon obesulus affinis
sequencing method	Illumina SBS, short PE reads
species	obesulus
state_or_region	Tasmania
tissue_number	ANWC M29477
totalmapped2tgt	0.4151
totalpaired	0.306
totalreadsstart	2083569
voucher_number	ANWC M29477
voucher_or_tissue_number	ANWC M29477
wild_captive	wild