U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

S1C28809_SP349

Identifiers
BioSample: SAMEA8943808; SRA: ERS6626644
Organism
uncultured Acidovorax sp.
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax; environmental samples
Attributes
collection date2020-10-09
broad-scale environmental contextplant associated biome
local-scale environmental contextphyllosphere
environmental mediumorganic material
geographic locationChina
investigation typemetagenome-assembled genome
isolation sourcephyllosphere_metagenome_of_Oryza sativa
project nameRecovery of metagenome-assembled genomes from 110 rice cultivars
sample nameS1C28809_SP349
ENA first public2021-08-20
ENA last update2021-08-20
ENA-CHECKLISTERC000050
External IdSAMEA8943808
INSDC center aliasINSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC center nameINSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC first public2021-08-20T20:31:33Z
INSDC last update2021-08-20T20:31:33Z
INSDC statuspublic
Submitter IdS1C28809_SP349
assembly softwareMegahit
binning parametersdefault
binning softwarevamb
completeness score99
completeness softwareCheckM
contamination score0
geographic location (latitude)N28.8
geographic location (longitude)E112.2
metagenomic sourceplant metagenome
sample derived fromERS6595593,ERS6595703,ERS6595813
sequencing methodIllumina NovaSeq 6000
BioProject
PRJEB45634 Recovery of metagenome-assembled genomes from 110 rice cultivars
Retrieve all samples from this project

Submission
EBI; 2021-09-04
Accession:
SAMEA8943808
ID:
21224826

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center