S3C94_SP310

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Result Filters

Organism: uncultured Acidovorax sp.
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax; environmental samples

Attributes

collection date	2020-10-09
broad-scale environmental context	plant associated biome
local-scale environmental context	phyllosphere
environmental medium	organic material
geographic location	China
investigation type	metagenome-assembled genome
isolation source	phyllosphere_metagenome_of_Oryza sativa
project name	Recovery of metagenome-assembled genomes from 110 rice cultivars
sample name	S3C94_SP310
ENA first public	2021-08-20
ENA last update	2021-08-20
ENA-CHECKLIST	ERC000050
External Id	SAMEA8943879
INSDC center alias	INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC center name	INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC first public	2021-08-20T20:31:33Z
INSDC last update	2021-08-20T20:31:33Z
INSDC status	public
Submitter Id	S3C94_SP310
assembly software	Megahit
binning parameters	default
binning software	vamb
completeness score	100
completeness software	CheckM
contamination score	0
geographic location (latitude)	N28.8
geographic location (longitude)	E112.2
metagenomic source	plant metagenome
sample derived from	ERS6595590,ERS6595700,ERS6595810
sequencing method	Illumina NovaSeq 6000

BioProject: PRJEB45634 Recovery of metagenome-assembled genomes from 110 rice cultivars
Retrieve all samples from this project

S3C94_SP310
S3C94_SP310

biosample
SP301_2_metabat2_genome_mining.23_sub_cleaned
SP301_2_metabat2_genome_mining.23_sub_cleaned

biosample
S2C87442_SP39
S2C87442_SP39

biosample
S1C28809_SP349
S1C28809_SP349

biosample
SP128_1_metabat2_genome_mining.23_sub
SP128_1_metabat2_genome_mining.23_sub

biosample

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