S3C221_SP309

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Result Filters

Organism: uncultured Chryseobacterium sp.
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Chryseobacterium group; Chryseobacterium; environmental samples

Attributes

collection date	2020-10-09
broad-scale environmental context	plant associated biome
local-scale environmental context	phyllosphere
environmental medium	organic material
geographic location	China
investigation type	metagenome-assembled genome
isolation source	phyllosphere_metagenome_of_Oryza sativa
project name	Recovery of metagenome-assembled genomes from 110 rice cultivars
sample name	S3C221_SP309
ENA first public	2021-08-20
ENA last update	2021-08-20
ENA-CHECKLIST	ERC000050
External Id	SAMEA8943922
INSDC center alias	INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC center name	INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC first public	2021-08-20T20:31:33Z
INSDC last update	2021-08-20T20:31:33Z
INSDC status	public
Submitter Id	S3C221_SP309
assembly software	Megahit
binning parameters	default
binning software	vamb
completeness score	91
completeness software	CheckM
contamination score	2
geographic location (latitude)	N28.8
geographic location (longitude)	E112.2
metagenomic source	plant metagenome
sample derived from	ERS6595589,ERS6595699,ERS6595809
sequencing method	Illumina NovaSeq 6000

BioProject: PRJEB45634 Recovery of metagenome-assembled genomes from 110 rice cultivars
Retrieve all samples from this project

S3C221_SP309
S3C221_SP309

biosample
SP226_1_metabat2_genome_mining.5
SP226_1_metabat2_genome_mining.5

biosample
SP92_3_metabat2_genome_mining.5_sub
SP92_3_metabat2_genome_mining.5_sub

biosample
hypothetical protein CRUP_001542 [Coryphaenoides rupestris]
hypothetical protein CRUP_001542 [Coryphaenoides rupestris]
gi|2059537098|gb|KAG7271982.1||gnl| IJE|CRUPGENE028902-RA:cds

Protein
Art5p [Saccharomyces cerevisiae S288C]
Art5p [Saccharomyces cerevisiae S288C]
gi|6321506|ref|NP_011582.1|

Protein

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