maxbin_SP287_3.002_sub_cleaned

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Result Filters

Organism: uncultured Mucilaginibacter sp.
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter; environmental samples

Attributes

collection date	2020-10-09
broad-scale environmental context	plant associated biome
local-scale environmental context	phyllosphere
environmental medium	organic material
geographic location	China
investigation type	metagenome-assembled genome
isolation source	phyllosphere_metagenome_of_Oryza sativa
project name	Recovery of metagenome-assembled genomes from 110 rice cultivars
sample name	maxbin_SP287_3.002_sub_cleaned
ENA first public	2021-08-20
ENA last update	2021-08-20
ENA-CHECKLIST	ERC000050
External Id	SAMEA8943926
INSDC center alias	INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC center name	INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC first public	2021-08-20T20:31:33Z
INSDC last update	2021-08-20T20:31:33Z
INSDC status	public
Submitter Id	maxbin_SP287_3.002_sub_cleaned
assembly software	Megahit
binning parameters	default
binning software	maxbin
completeness score	92
completeness software	CheckM
contamination score	3
geographic location (latitude)	N28.8
geographic location (longitude)	E112.2
metagenomic source	plant metagenome
sample derived from	ERS6595802
sequencing method	Illumina NovaSeq 6000

BioProject: PRJEB45634 Recovery of metagenome-assembled genomes from 110 rice cultivars
Retrieve all samples from this project

maxbin_SP287_3.002_sub_cleaned
maxbin_SP287_3.002_sub_cleaned

biosample
S3C63226_SP133
S3C63226_SP133

biosample
SP242_2_metabat2_genome_mining.26_cleaned
SP242_2_metabat2_genome_mining.26_cleaned

biosample
Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410007I02...
Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410007I02 product:serine hydroxymethyl transferase 1 (soluble), full insert sequence
gi|12845884|dbj|AK010439.1|

Nucleotide

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