Pathogen: environmental/food/other sample from Sal... - BioSample - NCBI

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Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Agona

Identifiers: BioSample: SAMN02777746; Sample name: NY-32458; SRA: SRS815586

Organism: Salmonella enterica subsp. enterica serovar Agona
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

serovar	Agona
strain	NY-32458
isolation source	ground turkey
source type	food
Interagency Food Safety Analytics Collaboration (IFSAC) category	turkey
collection date	2003
geographic location	USA:NY
latitude and longitude	missing
collected by	FDA
sub species	enterica
NARMS isolate number	CVM 32458
ontological term	turkey (ground or minced):FOODON_00002714
attribute_package	environmental/food/other

BioProject: PRJNA183850 Salmonella enterica
Retrieve all samples from this project

Submission: FDA/CFSAN/NY_State; 2014-05-14

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	susceptible	==	2	mg/L	MIC				CLSI
amoxicillin-clavulanic acid	susceptible	<=	1/0.5	mg/L	MIC				CLSI
ampicillin	susceptible	<=	1	mg/L	MIC				CLSI
cefoxitin	susceptible	==	8	mg/L	MIC				CLSI
ceftiofur	susceptible	==	0.5	mg/L	MIC				CLSI
ceftriaxone	susceptible	<=	0.25	mg/L	MIC				CLSI
chloramphenicol	susceptible	==	8	mg/L	MIC				CLSI
ciprofloxacin	susceptible	<=	0.015	mg/L	MIC				CLSI
gentamicin	susceptible	==	0.5	mg/L	MIC				CLSI
kanamycin	susceptible	<=	8	mg/L	MIC				CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC				CLSI
streptomycin	susceptible	<=	32	mg/L	MIC				NARMS
sulfamethoxazole	resistant	>	512	mg/L	MIC				CLSI
tetracycline	resistant	>	32	mg/L	MIC				CLSI
trimethoprim-sulfamethoxazole	susceptible	<=	0.125/2.4	mg/L	MIC				CLSI

Accession:: SAMN02777746
ID:: 2777746

BioProject SRA Nucleotide

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Pathogen: environmental/food/other sample from Salmonella enterica subsp. enteri...
Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Agona

biosample
CAMSAP1 calmodulin regulated spectrin associated protein 1 [Homo sapiens]
CAMSAP1 calmodulin regulated spectrin associated protein 1 [Homo sapiens]
Gene ID:157922

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Gene Links for GEO Profiles (Select 40986695) (1)
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RNA for Nucleotide (Select 1919258343) (4104)
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ClinVar for PubMed (Select 29636544) (1)
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